CDS

Accession Number TCMCG006C00370
gbkey CDS
Protein Id XP_022576270.1
Location join(2181375..2181703,2181777..2181894,2182555..2182907,2183098..2183208,2183293..2183409,2183531..2183578,2186997..2187047,2187163..2187280)
Gene LOC106406292
GeneID 106406292
Organism Brassica napus

Protein

Length 414aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022720549.1
Definition zinc finger protein VAR3, chloroplastic-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description zinc finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K14651        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1900865        [VIEW IN EMBL-EBI]
GO:1900871        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCTTCAAGAATCTTCCTAGTCGGAAACTCAATCTTCCGACCTCAAAACCCCTCCTCCTTTCCACTCTCTCTCAACCGCTTCCCCTCTGTTTCCCTCCGCCTCCGCTGCTTCTCAAACGCCACCGCCACCGCCGCCGCATCAGCCACCGTAGATTCCGATTCTCCGTCTCCCCATCCATGGCCAGAGTGGATAAACTTCGTCGACCGCCTGAAGACCAAAGGCTACTTCACCAAAAACATCGAAGACGACACTGTTTATCAGGAAATGAACGTAGTTAAGGACGCTTGTCTCAGCTTCGCTCGCGACCGTTACGACGTCCTTAGATCCTTGTCGTCGAGTGATGTACAAGCTCTCGTGGAGCGTGGATGCCCTAATCTCTTTCGCAAAACTGTTAACTCATCTAAAAGGATCCGAGCTCATGTTAAATTAGACGAAGGAGATGTTTGTGGTTCTTGTGAGCTTCGTAGCTCTTGTGATAGAGCTTATGTGATACTTAAGGACACAGAAGCTGATGCTCGAACCGTTGATGTCATGCGTTTGTTACTGTTCAATGCGCTTGATTCGGTTGTTGTCTCTCGAGGGGAGGTTCCACCAGGGAAAGAGCTTGTGCATGAGTCTGCAAGGAGACTTCTTTTGGAGTTGCTTGAGCTCAGTGAGAAGCCTGTGAACCCTGTTTTGCCCAAACCTGCGGCCAAGGTAGCGTTGCCTCCTAAGGAGAGGGTTTTTAAATCGAGGAGTGATGAGCCTTCTCAGCGTGTTCGGTCTCAGTACAATGCAGATTGGGCGTGTCCTAAGTGTGACTTTTTAAACTTTGCGAGAAATGAAAGATGCCGAGAGTGCAATGAGGTAGCTGACAGACGATCTGTTGCTGCTGTTGTCAAGGAAGGAGACTGGCTATGTCCTGAGTGCAATTTCTCAAACTTCTCAAGAAACCAGAGCTGTCTGAAGTGCAAAGCAAAGGGGCCAAAGAGAAGTTCAATGGAGAATATTGAAATGAAAAAGGGAGACTGGAACTGCTCTGGGTGTGGATTCATGAACTTTTCTAGCAACAAAAAGTGTAAACAGTGTAGGGAACAACGTCCTCCAAGGCAACTTGAGCCTGGAGAATGGGAATGTCCTTCATGCGACTTCTTGAACTATAGGAGAAACACTGTTTGCAAGAAATGCGAGTGCAAACGACCTAGTGAATCCAACAACCATGAAGATGATCATTCATGGAAGCGACCTGCCTTACTATAA
Protein:  
MSSSRIFLVGNSIFRPQNPSSFPLSLNRFPSVSLRLRCFSNATATAAASATVDSDSPSPHPWPEWINFVDRLKTKGYFTKNIEDDTVYQEMNVVKDACLSFARDRYDVLRSLSSSDVQALVERGCPNLFRKTVNSSKRIRAHVKLDEGDVCGSCELRSSCDRAYVILKDTEADARTVDVMRLLLFNALDSVVVSRGEVPPGKELVHESARRLLLELLELSEKPVNPVLPKPAAKVALPPKERVFKSRSDEPSQRVRSQYNADWACPKCDFLNFARNERCRECNEVADRRSVAAVVKEGDWLCPECNFSNFSRNQSCLKCKAKGPKRSSMENIEMKKGDWNCSGCGFMNFSSNKKCKQCREQRPPRQLEPGEWECPSCDFLNYRRNTVCKKCECKRPSESNNHEDDHSWKRPALL